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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15738 | + | 67724 | 89 | 24.5 | -35.36 | 5' arm 3' arm | |||
| 15739 | + | 68185 | 90 | 22.5 | -34.5 | 5' arm 3' arm | |||
| 15740 | + | 68329 | 90 | 21 | -21.8 | 5' arm 3' arm | |||
| 15741 | + | 68800 | 89 | 19 | -25.3 | 5' arm 3' arm | |||
| 15742 | + | 69213 | 90 | 20.5 | -22.9 | 5' arm 3' arm | |||
| 15743 | + | 69465 | 86 | 20 | -24 | 5' arm 3' arm | |||
| 15744 | + | 71190 | 87 | 20 | -26.1 | 5' arm 3' arm | |||
| 15745 | + | 72027 | 90 | 22.5 | -22.2 | 5' arm 3' arm | |||
| 15746 | + | 73138 | 85 | 19 | -26.3 | 5' arm 3' arm | |||
| 15747 | + | 74241 | 90 | 20 | -24.4 | YP_214062 | 5' arm 3' arm | ||
| 15748 | + | 74483 | 88 | 22 | -24.9 | YP_214062 | 5' arm 3' arm | ||
| 15749 | + | 75048 | 87 | 20 | -25.3 | YP_214062 | 5' arm 3' arm | ||
| 15750 | + | 75370 | 87 | 19.5 | -29.7 | YP_214062 | 5' arm 3' arm | ||
| 15751 | + | 75979 | 87 | 22 | -23.4 | YP_214063 | 5' arm 3' arm | ||
| 15752 | + | 76109 | 83 | 19.5 | -21.5 | YP_214063 | 5' arm 3' arm | ||
| 15753 | + | 76387 | 88 | 20 | -24.1 | YP_214063 | 5' arm 3' arm | ||
| 15754 | + | 76597 | 88 | 19.5 | -24.9 | YP_214064 | 5' arm 3' arm | ||
| 15755 | + | 76752 | 87 | 19 | -25.6 | YP_214064 | 5' arm 3' arm | ||
| 15756 | + | 78083 | 86 | 20.5 | -24.9 | YP_214065 | 5' arm 3' arm | ||
| 15757 | + | 78385 | 87 | 21.5 | -20 | YP_214065 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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