miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24886	+	45122	89	21.5	-20.9	NP_945096		5' arm      3' arm
24887	+	45433	89	21.5	-25.5	NP_945097		5' arm      3' arm
24888	+	45834	90	22	-21.5	NP_945098		5' arm      3' arm
24889	+	46302	90	21	-23.1	NP_945098		5' arm      3' arm
24890	+	46621	89	22.5	-24.5	NP_945098		5' arm      3' arm
24891	+	47324	84	19.5	-21.7	NP_945099		5' arm      3' arm
24892	+	47554	90	22	-21.7	NP_945099		5' arm      3' arm
24893	+	47998	89	22.5	-21.8	NP_945100		5' arm      3' arm
24894	+	48246	86	21	-23.7	NP_945101		5' arm      3' arm
24895	+	48827	90	21.5	-24.9	NP_945102		5' arm      3' arm
24896	+	50154	88	22	-25.7	NP_945104		5' arm      3' arm
24897	+	50924	88	21	-23.3	NP_945106		5' arm      3' arm
24898	+	51103	89	20	-21.5	NP_945107		5' arm      3' arm
24899	+	51343	87	22	-26.4	NP_945108		5' arm      3' arm
24900	+	53734	90	21.5	-26.1	NP_945111		5' arm      3' arm
24901	+	53837	90	21	-21.7	NP_945111		5' arm      3' arm
24902	+	54589	89	19	-21.9	NP_945113		5' arm      3' arm
24903	-	1215	88	23.5	-32.1	NP_945032		5' arm      3' arm
24904	-	4071	88	21.5	-21.9	NP_945034		5' arm      3' arm
24905	-	4859	90	21.5	-23.6	NP_945035		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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