miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8868	+	49467	90	20	-26.4	NP_061572		5' arm      3' arm
8869	+	50828	89	20	-19.91	NP_061575		5' arm      3' arm
8870	+	51342	87	20	-21.3	NP_061576		5' arm      3' arm
8871	+	53327	88	20.5	-24.1			5' arm      3' arm
8872	+	53594	87	21.5	-19.9			5' arm      3' arm
8873	+	54177	89	19.5	-22.4			5' arm      3' arm
8874	+	54295	87	23.5	-24.1	NP_061583		5' arm      3' arm
8875	+	55430	90	20	-27.3	NP_061588		5' arm      3' arm
8876	-	129	90	21	-23.7	NP_061497		5' arm      3' arm
8877	-	1424	90	24	-22.9	NP_061498		5' arm      3' arm
8878	-	2535	76	20	-20.7	NP_061500		5' arm      3' arm
8879	-	2645	90	20	-28.7	NP_061500		5' arm      3' arm
8880	-	3082	85	21.5	-22.9	NP_061500		5' arm      3' arm
8881	-	3470	90	19	-21	NP_061500		5' arm      3' arm
8882	-	3830	89	20.5	-22.6	NP_061501		5' arm      3' arm
8883	-	4329	89	21.5	-27.5	NP_061501		5' arm      3' arm
8884	-	4786	89	20	-21.4	NP_061502		5' arm      3' arm
8885	-	4950	90	19	-20.7	NP_061502		5' arm      3' arm
8886	-	5079	89	21.5	-21	NP_061502		5' arm      3' arm
8887	-	5278	90	22.5	-23.8	NP_061502		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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