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| GenBank Identifier | RefSeq Acc. | Name |
| 28373214 | NC_001347.2 | Human herpesvirus 5 (laboratory strain AD169) |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 1637 | + | 97823 | 79 | 21 | -24.5 | 5' arm 3' arm | |||
| 1638 | + | 99212 | 85 | 26 | -34 | NP_040003 | 5' arm 3' arm | ||
| 1639 | + | 99374 | 90 | 20 | -25.3 | NP_040003 | 5' arm 3' arm | ||
| 1640 | + | 99499 | 90 | 23 | -23.4 | NP_040003 | 5' arm 3' arm | ||
| 1641 | + | 99698 | 90 | 23 | -24.7 | NP_040003 | 5' arm 3' arm | ||
| 1642 | + | 100145 | 87 | 21.5 | -21.6 | NP_040003 | 5' arm 3' arm | ||
| 1643 | + | 100829 | 90 | 23 | -31.9 | NP_040003 | 5' arm 3' arm | ||
| 1644 | + | 101106 | 89 | 24.5 | -24.4 | NP_040003 | 5' arm 3' arm | ||
| 1645 | + | 101217 | 90 | 19.5 | -20.7 | NP_040003 | 5' arm 3' arm | ||
| 1646 | + | 101624 | 89 | 20 | -24.9 | NP_783788 | 5' arm 3' arm | ||
| 1647 | + | 101759 | 90 | 21 | -20.6 | NP_783788 | 5' arm 3' arm | ||
| 1648 | + | 102661 | 86 | 19.5 | -24.6 | NP_783788 | 5' arm 3' arm | ||
| 1649 | + | 103541 | 89 | 22 | -23.1 | NP_783788 | 5' arm 3' arm | ||
| 1650 | + | 103701 | 90 | 20 | -24.8 | NP_783788 | 5' arm 3' arm | ||
| 1651 | + | 104294 | 85 | 21 | -35.4 | NP_783789 | 5' arm 3' arm | ||
| 1652 | + | 104772 | 87 | 21 | -20.4 | NP_783789 | 5' arm 3' arm | ||
| 1653 | + | 105582 | 87 | 20 | -21.5 | NP_040006 | 5' arm 3' arm | ||
| 1654 | + | 105671 | 89 | 23.5 | -24.94 | NP_040006 | 5' arm 3' arm | ||
| 1655 | + | 109013 | 89 | 23 | -23.5 | NP_040009 | 5' arm 3' arm | ||
| 1656 | + | 109782 | 88 | 20 | -23.6 | NP_040009 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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