miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18639	+	47173	89	23	-25.4	NP_817669		5' arm      3' arm
18640	+	48639	90	20	-19.5	NP_817674		5' arm      3' arm
18641	+	48729	88	20	-20.7	NP_817674		5' arm      3' arm
18642	+	48888	88	21.5	-22.8	NP_817674		5' arm      3' arm
18643	+	49976	89	20.5	-24.7			5' arm      3' arm
18644	+	50155	89	22	-26			5' arm      3' arm
18645	+	50554	90	20.5	-25.5			5' arm      3' arm
18646	-	468	90	20.5	-26.9			5' arm      3' arm
18647	-	591	90	20	-24.2	NP_817592		5' arm      3' arm
18648	-	846	87	20	-23.5	NP_817592		5' arm      3' arm
18649	-	1014	86	21.5	-22.4	NP_817593		5' arm      3' arm
18650	-	1208	87	19.5	-32.7	NP_817593		5' arm      3' arm
18651	-	1483	88	20	-21	NP_817594		5' arm      3' arm
18652	-	1623	84	20	-26.2	NP_817594		5' arm      3' arm
18653	-	2543	88	20	-22.3	NP_817595		5' arm      3' arm
18654	-	2902	88	20	-21.1	NP_817596		5' arm      3' arm
18655	-	3124	89	23	-23.9	NP_817596		5' arm      3' arm
18656	-	3276	81	22.5	-19.6	NP_817596		5' arm      3' arm
18657	-	4028	87	19	-22.4			5' arm      3' arm
18658	-	4319	87	23.5	-23.7	NP_817598		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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