miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1657	+	111869	87	25	-28.9	NP_040010		5' arm      3' arm
1658	+	112113	90	19	-20.7	NP_040011		5' arm      3' arm
1659	+	113194	89	21	-24.5	NP_040011		5' arm      3' arm
1660	+	113767	89	25	-23.9			5' arm      3' arm
1661	+	114476	90	24	-20.9	NP_040012		5' arm      3' arm
1662	+	114897	90	22	-24	NP_040012		5' arm      3' arm
1663	+	115323	87	21.5	-26.3	NP_040013		5' arm      3' arm
1664	+	115803	88	22	-20.5	NP_040013		5' arm      3' arm
1665	+	116007	90	19.5	-20.9	NP_040013		5' arm      3' arm
1666	+	116150	87	19.5	-25.9	NP_040014		5' arm      3' arm
1667	+	116352	82	20.5	-25.1	NP_040014		5' arm      3' arm
1668	+	116901	90	20	-21.09	NP_040014		5' arm      3' arm
1669	+	117157	88	19.5	-22.5	NP_040014		5' arm      3' arm
1670	+	117521	89	24.5	-32.6	NP_040015		5' arm      3' arm
1671	+	117998	90	21	-23	NP_040014		5' arm      3' arm
1672	+	118474	90	22	-26.4	NP_040017		5' arm      3' arm
1673	+	118612	87	22.5	-21.2	NP_040017		5' arm      3' arm
1674	+	118815	86	19.5	-19.4	NP_040017		5' arm      3' arm
1675	+	119288	89	22	-22.87	NP_040017		5' arm      3' arm
1676	+	120483	89	21.5	-20	NP_040018		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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