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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15778 | + | 94477 | 86 | 23.5 | -32.1 | 5' arm 3' arm | |||
| 15779 | + | 95210 | 87 | 21.5 | -21.82 | 5' arm 3' arm | |||
| 15780 | + | 96194 | 90 | 23 | -20.5 | YP_214071 | 5' arm 3' arm | ||
| 15781 | + | 96307 | 88 | 22 | -29.6 | YP_214071 | 5' arm 3' arm | ||
| 15782 | + | 96397 | 90 | 19.5 | -23.4 | YP_214071 | 5' arm 3' arm | ||
| 15783 | + | 96565 | 89 | 21 | -24.6 | YP_214071 | 5' arm 3' arm | ||
| 15784 | + | 96947 | 89 | 25 | -26.5 | YP_214071 | 5' arm 3' arm | ||
| 15785 | + | 97547 | 90 | 19.5 | -19.4 | YP_214071 | 5' arm 3' arm | ||
| 15786 | + | 98221 | 86 | 21.5 | -24.5 | YP_214071 | 5' arm 3' arm | ||
| 15787 | + | 100840 | 87 | 21.5 | -23.3 | YP_214073 | 5' arm 3' arm | ||
| 15788 | + | 101001 | 89 | 22.5 | -25.5 | YP_214073 | 5' arm 3' arm | ||
| 15789 | + | 101511 | 87 | 20 | -23.81 | YP_214073 | 5' arm 3' arm | ||
| 15790 | + | 101601 | 89 | 21 | -25.4 | YP_214073 | 5' arm 3' arm | ||
| 15791 | + | 102346 | 87 | 19 | -26.8 | YP_214074 | 5' arm 3' arm | ||
| 15792 | + | 103987 | 87 | 22.5 | -21.6 | YP_214075 | 5' arm 3' arm | ||
| 15793 | + | 104133 | 87 | 21 | -19.6 | YP_214075 | 5' arm 3' arm | ||
| 15794 | + | 107244 | 89 | 19.5 | -28 | YP_214078 | 5' arm 3' arm | ||
| 15795 | + | 107466 | 84 | 19 | -26.11 | YP_214078 | 5' arm 3' arm | ||
| 15796 | + | 107607 | 85 | 22.5 | -23.5 | YP_214078 | 5' arm 3' arm | ||
| 15797 | + | 108719 | 89 | 19 | -21.1 | YP_214079 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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