miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28844	+	111981	86	19	-25.3	YP_067991		5' arm      3' arm
28845	+	112590	88	24.5	-21.2	YP_067991		5' arm      3' arm
28846	+	113714	89	21	-20.6	YP_067992		5' arm      3' arm
28847	+	114187	89	22.5	-31	YP_067993		5' arm      3' arm
28848	+	114549	89	23	-21.4	YP_067993		5' arm      3' arm
28849	+	114755	88	21	-24.6	YP_067993		5' arm      3' arm
28850	+	115550	82	21.5	-24.9	YP_067994		5' arm      3' arm
28851	+	116905	87	20	-24.7	YP_067994		5' arm      3' arm
28852	+	119089	87	21.5	-19.8			5' arm      3' arm
28853	+	119275	89	23.5	-27.3			5' arm      3' arm
28854	+	119878	87	19	-21.04	YP_067995		5' arm      3' arm
28855	+	122865	90	24	-20.2	YP_067997		5' arm      3' arm
28856	+	123133	90	21	-23.6	YP_067997		5' arm      3' arm
28857	+	123332	90	21	-20.5	YP_067997		5' arm      3' arm
28858	+	124212	84	21.5	-24.2	YP_067997		5' arm      3' arm
28859	+	125197	89	20.5	-24	YP_067998		5' arm      3' arm
28860	+	126923	87	22	-22.3	YP_067999		5' arm      3' arm
28861	+	128355	88	20	-32.5	YP_068000		5' arm      3' arm
28862	+	131753	89	22.5	-27.3	YP_068002		5' arm      3' arm
28863	+	133104	90	28.5	-32.2		rlcv-mir-rL1-3	3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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