miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2761	-	43240	88	20	-24.9	YP_053069		5' arm      3' arm
2762	-	45285	90	22	-28.6	YP_053069		5' arm      3' arm
2763	-	45928	88	20	-20.9			3' arm
2764	-	46023	90	24.5	-21.4	YP_053069		5' arm      3' arm
2765	-	47611	90	21.5	-22.1	YP_053071		5' arm      3' arm
2766	-	47771	90	22	-22.8	YP_053071		5' arm      3' arm
2767	-	57270	90	22.5	-24.9	YP_053076		5' arm      3' arm
2768	-	57776	85	21	-23	YP_053076		5' arm      3' arm
2769	-	59548	89	20	-19.4	YP_053077		5' arm      3' arm
2770	-	60170	89	22	-20.1	YP_053077		5' arm      3' arm
2771	-	60553	90	19	-22.2	YP_053077		5' arm      3' arm
2772	-	61133	89	22	-25.2	YP_053077		5' arm      3' arm
2773	-	61623	89	20	-21	YP_053078		5' arm      3' arm
2774	-	63390	87	20.5	-23.1	YP_053078		5' arm      3' arm
2775	-	64695	90	24	-21.8	YP_053079		5' arm      3' arm
2776	-	68394	90	19.5	-21.6	YP_053082		5' arm      3' arm
2777	-	71559	88	19	-22	YP_053085		5' arm      3' arm
2778	-	74438	88	26	-31			5' arm      3' arm
2779	-	75494	89	19.5	-19.7	YP_053086		5' arm      3' arm
2780	-	79885	85	20	-22.5	YP_053088		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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