miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1677	+	121496	89	23.5	-22.5	NP_040018		5' arm      3' arm
1678	+	123679	88	23	-21	NP_040019		5' arm      3' arm
1679	+	124093	88	21.5	-23.5			5' arm      3' arm
1680	+	124584	90	21	-24	NP_040020		5' arm      3' arm
1681	+	124801	90	23	-19.6	NP_040020		5' arm      3' arm
1682	+	125011	84	19.5	-24.1			5' arm      3' arm
1683	+	125251	89	24.5	-29.2	NP_040021		5' arm      3' arm
1684	+	125458	90	20	-26	NP_040021		5' arm      3' arm
1685	+	125559	90	21.5	-22.2	NP_040021		5' arm      3' arm
1686	+	125692	85	19.5	-19.4	NP_040021		5' arm      3' arm
1687	+	126928	89	21.5	-23.2	NP_040021		5' arm      3' arm
1688	+	127031	81	19.5	-21.8	NP_040021		5' arm      3' arm
1689	+	128144	84	20	-26.5	NP_040021		5' arm      3' arm
1690	+	128774	89	21	-24.9	NP_040021		5' arm      3' arm
1691	+	129408	88	19.5	-21.4	NP_040022		5' arm      3' arm
1692	+	130875	90	20.5	-21.2	NP_040022		5' arm      3' arm
1693	+	131888	90	20	-22.3	NP_040022		5' arm      3' arm
1694	+	132379	90	21.5	-20.3	NP_040023		5' arm      3' arm
1695	+	132474	90	22	-20.5	NP_040023		5' arm      3' arm
1696	+	132612	90	21	-23.9	NP_040023		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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