miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
41179361 NC_005357.1 Bordetella phage BPP-1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
26443 + 1074 89 20.5 -24.8 NP_958672 5' arm      3' arm
26442 + 823 88 19 -22.7 NP_958672 5' arm      3' arm
26441 + 637 83 19.5 -29.5 NP_958671 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.