miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24892	+	47554	90	22	-21.7	NP_945099		5' arm      3' arm
24891	+	47324	84	19.5	-21.7	NP_945099		5' arm      3' arm
24890	+	46621	89	22.5	-24.5	NP_945098		5' arm      3' arm
24889	+	46302	90	21	-23.1	NP_945098		5' arm      3' arm
24888	+	45834	90	22	-21.5	NP_945098		5' arm      3' arm
24887	+	45433	89	21.5	-25.5	NP_945097		5' arm      3' arm
24886	+	45122	89	21.5	-20.9	NP_945096		5' arm      3' arm
24885	+	44161	88	21.5	-25.3	NP_945094		5' arm      3' arm
24884	+	43275	81	19	-29.7	NP_945092		5' arm      3' arm
24883	+	41356	87	20.5	-23	NP_945089		5' arm      3' arm
24882	+	41170	81	23.5	-25	NP_945089		5' arm      3' arm
24881	+	40897	88	21.5	-24.8	NP_945089		5' arm      3' arm
24880	+	39307	89	20	-20.6	NP_945085		5' arm      3' arm
24879	+	39207	90	22.5	-21.4	NP_945084		5' arm      3' arm
24878	+	38787	87	23	-19.9	NP_945083		5' arm      3' arm
24877	+	37931	89	22	-24.7	NP_945081		5' arm      3' arm
24876	+	37819	89	22	-26.1			5' arm      3' arm
24875	+	37119	88	19.5	-28.6	NP_945079		5' arm      3' arm
24874	+	36360	88	24.5	-29.7	NP_945078		5' arm      3' arm
24873	+	35351	87	23.5	-30.5	NP_945077		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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