miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31450	+	965	90	30.5	-31.5			5' arm      3' arm
31449	-	4090	90	19	-28.8			5' arm      3' arm
31448	-	3682	90	21	-27.4			5' arm      3' arm
31447	-	674	89	22	-29.9			5' arm      3' arm
31446	-	538	90	31.5	-28.7			5' arm      3' arm
31445	+	16367	89	23.5	-29			5' arm      3' arm
31444	+	5339	90	35.5	-28.5			5' arm      3' arm
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31442	+	5156	89	34.5	-33.1			5' arm      3' arm
31441	+	3599	79	22	-24.4			5' arm      3' arm
31440	+	449	90	31.5	-29.9			5' arm      3' arm
31439	+	6243	88	27.5	-21	YP_184800		5' arm      3' arm
31438	+	1701	90	22.5	-27.8			5' arm      3' arm
31437	+	699	86	22.5	-21.8			5' arm      3' arm
31436	-	2503	90	23.5	-22.6	YP_184799		5' arm      3' arm
31435	-	201	88	20	-31	YP_184798		5' arm      3' arm
31434	-	14530	90	27	-31.5			5' arm      3' arm
31433	-	13273	78	24	-25.6			5' arm      3' arm
31432	-	10666	89	27	-30.7			5' arm      3' arm
31431	+	22700	90	19.5	-19.8			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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