miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
16386	-	8623	87	22	-24.6	NP_665929		5' arm      3' arm
16385	-	8315	88	23	-26.9	NP_665929		5' arm      3' arm
16384	-	7651	88	19.5	-20.4	NP_665928		5' arm      3' arm
16383	-	5996	89	23.5	-27.1	NP_665926		5' arm      3' arm
16382	-	5593	87	23.5	-22.7	NP_665925		5' arm      3' arm
16381	-	5503	87	19	-19.6	NP_665925		5' arm      3' arm
16380	-	5208	90	20.5	-21.1	NP_665925		5' arm      3' arm
16379	-	4967	86	23.5	-19.7	NP_665925		5' arm      3' arm
16378	-	4635	85	23.5	-26.2	NP_665924		5' arm      3' arm
16377	-	4513	90	19	-25.9	NP_665924		5' arm      3' arm
16376	-	4386	88	23	-21.3	NP_665924		5' arm      3' arm
16375	-	4005	90	20	-24.4	NP_665924		5' arm      3' arm
16374	-	3742	90	20.5	-26	NP_665924		5' arm      3' arm
16373	-	3423	89	24	-28.3			5' arm      3' arm
16372	-	2903	85	20.5	-23.9	NP_665922		5' arm      3' arm
16371	-	2174	89	22	-25.2	NP_665920		5' arm      3' arm
16370	-	1976	86	21.5	-20.9	NP_665920		5' arm      3' arm
16369	-	1268	89	20	-20.9	NP_665920		5' arm      3' arm
16368	-	878	87	20.5	-28.2	NP_665920		5' arm      3' arm
16367	+	57658	85	19.5	-21.7	NP_666014		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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