miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24852	+	23900	87	20.5	-25.82	NP_945058		5' arm      3' arm
24851	+	23607	87	22	-26.3	NP_945058		5' arm      3' arm
24850	+	23195	89	21	-23.1	NP_945058		5' arm      3' arm
24849	+	21151	90	19.5	-27.2	NP_945054		5' arm      3' arm
24848	+	20827	89	20	-20.5	NP_945053		5' arm      3' arm
24847	+	19796	88	20	-29.8	NP_945051		5' arm      3' arm
24846	+	19374	86	22	-22.8	NP_945050		5' arm      3' arm
24845	+	18125	89	19	-20.2	NP_945050		5' arm      3' arm
24844	+	17849	90	19.5	-21.6	NP_945050		5' arm      3' arm
24843	+	16928	87	19.5	-22.4	NP_945050		5' arm      3' arm
24842	+	16820	90	21.5	-21.7	NP_945050		5' arm      3' arm
24841	+	15911	90	22.5	-21.1	NP_945049		5' arm      3' arm
24840	+	15632	89	20.5	-20.4	NP_945048		5' arm      3' arm
24839	+	15421	87	22	-23.3	NP_945048		5' arm      3' arm
24838	+	15294	89	21.5	-20.3	NP_945048		5' arm      3' arm
24837	+	14903	89	20.5	-21.2	NP_945047		5' arm      3' arm
24836	+	14531	89	21.5	-20.3	NP_945047		5' arm      3' arm
24835	+	14414	86	20	-20.7	NP_945047		5' arm      3' arm
24834	+	13806	90	21	-19.4	NP_945046		5' arm      3' arm
24833	+	13420	85	19.5	-23.6	NP_945046		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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