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| GenBank Identifier | RefSeq Acc. | Name |
| 51518014 | NC_006146.1 | Cercopithecine herpesvirus 15 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 29037 | - | 79348 | 89 | 22.5 | -28.51 | YP_067966 | 5' arm 3' arm | ||
| 29036 | - | 78615 | 89 | 22.5 | -24.3 | YP_067966 | 5' arm 3' arm | ||
| 29035 | - | 78524 | 86 | 19 | -22.6 | YP_067966 | 5' arm 3' arm | ||
| 29034 | - | 74317 | 90 | 22 | -24.23 | YP_067965 | 5' arm 3' arm | ||
| 29033 | - | 73583 | 81 | 22 | -24.5 | 5' arm 3' arm | |||
| 29032 | - | 69606 | 88 | 19 | -21 | YP_067960 | 5' arm 3' arm | ||
| 29031 | - | 69374 | 88 | 19 | -21.1 | YP_067960 | 5' arm 3' arm | ||
| 29030 | - | 67757 | 89 | 19 | -22.3 | YP_067958 | 5' arm 3' arm | ||
| 29029 | - | 66619 | 88 | 19 | -23.6 | YP_067958 | 5' arm 3' arm | ||
| 29028 | - | 62340 | 89 | 27 | -28.6 | YP_067955 | 5' arm 3' arm | ||
| 29027 | - | 62035 | 83 | 20 | -22.1 | YP_067955 | 5' arm 3' arm | ||
| 29026 | - | 61841 | 87 | 21.5 | -21.4 | YP_067955 | 5' arm 3' arm | ||
| 29025 | - | 61614 | 88 | 19 | -26.3 | YP_067955 | 5' arm 3' arm | ||
| 29024 | - | 61433 | 89 | 22 | -19.8 | YP_067955 | 5' arm 3' arm | ||
| 29023 | - | 60782 | 73 | 19 | -25 | YP_067954 | 5' arm 3' arm | ||
| 29022 | - | 60580 | 88 | 20 | -20.52 | YP_067954 | 5' arm 3' arm | ||
| 29021 | - | 57390 | 88 | 23 | -34.7 | YP_067952 | 5' arm 3' arm | ||
| 29020 | - | 56566 | 79 | 22.5 | -25.6 | YP_067951 | 5' arm 3' arm | ||
| 29019 | - | 56080 | 87 | 20 | -23.9 | YP_067951 | 5' arm 3' arm | ||
| 29018 | - | 55205 | 90 | 23.5 | -25.1 | YP_067951 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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