miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23969	+	63714	89	19	-23.3	NP_944308		5' arm      3' arm
23968	+	63003	86	20	-21.93			5' arm      3' arm
23967	+	62578	88	21.5	-29.5	NP_944306		5' arm      3' arm
23966	+	62432	87	25.5	-20.5			5' arm      3' arm
23965	+	60689	88	22	-21.24	NP_944303		5' arm      3' arm
23964	+	59748	89	22	-32.5	NP_944303		5' arm      3' arm
23963	+	58777	84	21	-21	NP_944303		5' arm      3' arm
23962	+	57821	89	22	-30	NP_944303		5' arm      3' arm
23961	+	57680	90	19	-27.6	NP_944303		5' arm      3' arm
23960	+	55914	83	19.5	-25.1	NP_944303		5' arm      3' arm
23959	+	55680	85	19.5	-32.7	NP_944303		5' arm      3' arm
23958	+	54990	89	19.5	-26.5	NP_944303		5' arm      3' arm
23957	+	54373	86	19.5	-21.2	NP_944303		5' arm      3' arm
23956	+	52997	90	19	-34	NP_944303		5' arm      3' arm
23955	+	52218	90	19.5	-24.7	NP_944303		5' arm      3' arm
23954	+	52021	87	19.5	-22.1	NP_944303		5' arm      3' arm
23953	+	50864	89	19.5	-33.9	NP_944303		5' arm      3' arm
23952	+	49953	84	19.5	-23.7	NP_944303		5' arm      3' arm
23951	+	49386	88	20.5	-31	NP_944303		5' arm      3' arm
23950	+	48725	77	19	-29.2	NP_944303		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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