miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29017	-	54381	90	20	-25.9	YP_067951		5' arm      3' arm
29016	-	49325	89	19	-23.5	YP_067950		5' arm      3' arm
29015	-	47978	86	22.5	-30	YP_067950		5' arm      3' arm
29014	-	47604	90	20	-20.4	YP_067950		5' arm      3' arm
29013	-	47399	88	21.5	-24.4	YP_067950		5' arm      3' arm
29012	-	45395	79	19.5	-22	YP_067950		5' arm      3' arm
29011	-	44540	90	20	-30	YP_067950		5' arm      3' arm
29010	-	43189	89	19	-22.1	YP_067949		5' arm      3' arm
29009	-	38627	88	21	-22	YP_067946		5' arm      3' arm
29008	-	37074	88	20	-23.4			5' arm      3' arm
29007	-	35679	82	19.5	-23.2			5' arm      3' arm
29006	-	35396	86	20	-28.4			5' arm      3' arm
29005	-	35056	90	19.5	-23.5			5' arm      3' arm
29004	-	34963	89	20	-21.9			5' arm      3' arm
29003	-	33564	77	20.5	-26.1			5' arm      3' arm
29002	-	32199	90	19.5	-20.2	YP_067943		5' arm      3' arm
29001	-	32056	89	22	-21.1	YP_067943		5' arm      3' arm
29000	-	31589	89	21	-26.5	YP_067943		5' arm      3' arm
28999	-	31484	90	20	-24.2	YP_067943		5' arm      3' arm
28998	-	31300	86	19.5	-20.8	YP_067943		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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