miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11026	-	85851	89	21	-26.3			5' arm      3' arm
10969	-	55659	90	19.5	-23.8			5' arm      3' arm
11075	-	107537	78	19	-27.09			5' arm      3' arm
10698	+	222	90	23.5	-21.9	NP_116330		5' arm      3' arm
10702	+	3818	87	22.5	-30.5	NP_116331		5' arm      3' arm
10701	+	3374	90	21	-25.3	NP_116331		5' arm      3' arm
10699	+	2329	88	22	-29.7	NP_116331		5' arm      3' arm
10700	+	2432	89	19.5	-24.5	NP_116331		5' arm      3' arm
10918	-	2149	89	19	-21.7	NP_116331		5' arm      3' arm
10703	+	4545	89	22	-19.7	NP_116332		5' arm      3' arm
10704	+	5186	89	20	-23	NP_116332		5' arm      3' arm
10705	+	5347	90	21	-21.1	NP_116332		5' arm      3' arm
10706	+	5857	89	22	-23.9	NP_116332		5' arm      3' arm
10919	-	6368	89	22.5	-29.6	NP_116333		5' arm      3' arm
10707	+	7592	89	22.5	-26.9	NP_116333		5' arm      3' arm
10922	-	9860	86	20.5	-25.3	NP_116334		5' arm      3' arm
10920	-	8072	89	20	-21.5	NP_116334		5' arm      3' arm
10921	-	8672	88	22	-25	NP_116334		5' arm      3' arm
10709	+	9167	88	20	-26.6	NP_116334		5' arm      3' arm
10708	+	8395	90	19.5	-22.3	NP_116334		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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