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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15700 | + | 42101 | 90 | 20 | -23.6 | 5' arm 3' arm | |||
| 15698 | + | 41658 | 90 | 19.5 | -23.7 | 5' arm 3' arm | |||
| 15699 | + | 41873 | 90 | 19.5 | -24.6 | 5' arm 3' arm | |||
| 15707 | + | 48200 | 90 | 24 | -20.9 | 5' arm 3' arm | |||
| 15705 | + | 47670 | 90 | 23.5 | -24.2 | 5' arm 3' arm | |||
| 15708 | + | 48508 | 88 | 21.5 | -24.6 | 5' arm 3' arm | |||
| 15703 | + | 45641 | 89 | 20 | -24.3 | 5' arm 3' arm | |||
| 15894 | + | 193912 | 86 | 20.5 | -28.1 | 5' arm 3' arm | |||
| 15886 | + | 185995 | 86 | 21 | -24.6 | 5' arm 3' arm | |||
| 15885 | + | 184395 | 85 | 25 | -32.5 | 5' arm 3' arm | |||
| 16191 | - | 190351 | 89 | 21 | -22.79 | 5' arm 3' arm | |||
| 16189 | - | 188865 | 88 | 23.5 | -24.3 | 5' arm 3' arm | |||
| 16180 | - | 182946 | 90 | 20 | -21 | 5' arm 3' arm | |||
| 16165 | - | 163396 | 88 | 20 | -31.6 | 5' arm 3' arm | |||
| 16233 | - | 229144 | 88 | 22 | -21.6 | 5' arm 3' arm | |||
| 16232 | - | 227186 | 90 | 22.5 | -23.6 | 5' arm 3' arm | |||
| 15928 | + | 225554 | 88 | 22 | -34.2 | 5' arm 3' arm | |||
| 15905 | + | 199388 | 90 | 20 | -19.7 | 5' arm 3' arm | |||
| 15882 | + | 180771 | 88 | 19 | -21.5 | 5' arm 3' arm | |||
| 15706 | + | 48109 | 89 | 20 | -19.81 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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