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| GenBank Identifier | RefSeq Acc. | Name |
| 10834856 | NC_002577.1 | Gallid herpesvirus 3 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9605 | + | 24740 | 89 | 22.5 | -20.2 | NP_066836 | 5' arm 3' arm | ||
| 9714 | - | 26772 | 81 | 19 | -22.2 | NP_066838 | 5' arm 3' arm | ||
| 9715 | - | 27874 | 90 | 22.5 | -27.1 | NP_066838 | 5' arm 3' arm | ||
| 9713 | - | 26184 | 87 | 20.5 | -24.5 | NP_066838 | 5' arm 3' arm | ||
| 9606 | + | 33298 | 90 | 21 | -22.4 | NP_066842 | 5' arm 3' arm | ||
| 9716 | - | 33242 | 87 | 21 | -22.3 | NP_066842 | 5' arm 3' arm | ||
| 9607 | + | 35361 | 90 | 21 | -21.7 | NP_066844 | 5' arm 3' arm | ||
| 9609 | + | 40833 | 81 | 22 | -20.5 | NP_066845 | 5' arm 3' arm | ||
| 9610 | + | 41061 | 89 | 20 | -34.3 | NP_066845 | 5' arm 3' arm | ||
| 9718 | - | 41650 | 90 | 19 | -24.1 | NP_066845 | 5' arm 3' arm | ||
| 9717 | - | 37385 | 88 | 20.5 | -23.5 | NP_066846 | 5' arm 3' arm | ||
| 9608 | + | 40225 | 89 | 21 | -20.5 | NP_066847 | 5' arm 3' arm | ||
| 9719 | - | 45353 | 89 | 22 | -29.6 | NP_066849 | 5' arm 3' arm | ||
| 9720 | - | 45568 | 85 | 24 | -25.9 | NP_066849 | 5' arm 3' arm | ||
| 9612 | + | 46578 | 88 | 19.5 | -19.6 | NP_066849 | 5' arm 3' arm | ||
| 9611 | + | 44356 | 90 | 22 | -21.3 | NP_066849 | 5' arm 3' arm | ||
| 9721 | - | 55657 | 80 | 20 | -21.4 | NP_066856 | 5' arm 3' arm | ||
| 9722 | - | 57158 | 87 | 23.5 | -23.8 | NP_066857 | 5' arm 3' arm | ||
| 9614 | + | 57828 | 86 | 19.5 | -30.4 | NP_066857 | 5' arm 3' arm | ||
| 9613 | + | 57673 | 85 | 19.5 | -20.8 | NP_066857 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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