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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24563 | - | 21134 | 89 | 19 | -26.9 | NP_944389 | 5' arm 3' arm | ||
| 24357 | + | 23010 | 90 | 23 | -22.6 | NP_944390 | 5' arm 3' arm | ||
| 24565 | - | 23462 | 90 | 19.5 | -27.8 | NP_944390 | 5' arm 3' arm | ||
| 24358 | + | 24064 | 90 | 19 | -20.4 | NP_944391 | 5' arm 3' arm | ||
| 24360 | + | 24863 | 86 | 21 | -24.2 | NP_944391 | 5' arm 3' arm | ||
| 24359 | + | 24228 | 88 | 21 | -27.71 | NP_944391 | 5' arm 3' arm | ||
| 24567 | - | 25940 | 90 | 21 | -26 | NP_944392 | 5' arm 3' arm | ||
| 24361 | + | 25740 | 88 | 22 | -19.4 | NP_944392 | 5' arm 3' arm | ||
| 24568 | - | 26342 | 86 | 19 | -20.3 | NP_944392 | 5' arm 3' arm | ||
| 24362 | + | 25861 | 90 | 19 | -21.3 | NP_944392 | 5' arm 3' arm | ||
| 24569 | - | 27951 | 86 | 19 | -23.1 | NP_944393 | 5' arm 3' arm | ||
| 24570 | - | 28149 | 90 | 22.5 | -23 | NP_944393 | 5' arm 3' arm | ||
| 24364 | + | 27924 | 90 | 21.5 | -30.9 | NP_944393 | 5' arm 3' arm | ||
| 24365 | + | 28241 | 90 | 19.5 | -19.5 | NP_944393 | 5' arm 3' arm | ||
| 24571 | - | 29868 | 90 | 19 | -20.8 | NP_944394 | 5' arm 3' arm | ||
| 24573 | - | 31193 | 90 | 24 | -28.3 | NP_944394 | 5' arm 3' arm | ||
| 24367 | + | 30334 | 87 | 20.5 | -20.9 | NP_944394 | 5' arm 3' arm | ||
| 24366 | + | 29777 | 90 | 20 | -33 | NP_944394 | 5' arm 3' arm | ||
| 24572 | - | 30327 | 86 | 19 | -27 | NP_944394 | 5' arm 3' arm | ||
| 24575 | - | 32383 | 90 | 22.5 | -35.5 | NP_944395 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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