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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24587 | - | 39284 | 87 | 21.5 | -25.8 | NP_944400 | 5' arm 3' arm | ||
| 24381 | + | 38507 | 88 | 22 | -22.5 | NP_944400 | 5' arm 3' arm | ||
| 24586 | - | 38982 | 86 | 21.5 | -25.1 | NP_944400 | 5' arm 3' arm | ||
| 24585 | - | 38757 | 90 | 22.5 | -26.2 | NP_944400 | 5' arm 3' arm | ||
| 24588 | - | 39440 | 90 | 20 | -23.9 | NP_944400 | 5' arm 3' arm | ||
| 24382 | + | 40271 | 89 | 22 | -19.8 | NP_944400 | 5' arm 3' arm | ||
| 24589 | - | 40988 | 89 | 21 | -20.5 | NP_944400 | 5' arm 3' arm | ||
| 24592 | - | 42470 | 90 | 21.5 | -23.1 | NP_944401 | 5' arm 3' arm | ||
| 24591 | - | 41410 | 87 | 21.5 | -20.4 | NP_944401 | 5' arm 3' arm | ||
| 24590 | - | 41294 | 90 | 23 | -23.6 | NP_944401 | 5' arm 3' arm | ||
| 24388 | + | 43445 | 90 | 19.5 | -20.9 | NP_944401 | 5' arm 3' arm | ||
| 24387 | + | 43215 | 90 | 19.5 | -26.7 | NP_944401 | 5' arm 3' arm | ||
| 24384 | + | 41558 | 88 | 19.5 | -23 | NP_944401 | 5' arm 3' arm | ||
| 24385 | + | 42424 | 88 | 21.5 | -21.62 | NP_944401 | 5' arm 3' arm | ||
| 24389 | + | 43614 | 89 | 21 | -21.4 | NP_944401 | 5' arm 3' arm | ||
| 24386 | + | 42521 | 86 | 25 | -21.6 | NP_944401 | 5' arm 3' arm | ||
| 24594 | - | 47198 | 83 | 19.5 | -30.3 | NP_944402 | 5' arm 3' arm | ||
| 24593 | - | 46500 | 90 | 20 | -25.5 | NP_944402 | 5' arm 3' arm | ||
| 24391 | + | 44291 | 90 | 21.5 | -23.2 | NP_944402 | 5' arm 3' arm | ||
| 24390 | + | 44035 | 89 | 20 | -29.9 | NP_944402 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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