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| GenBank Identifier | RefSeq Acc. | Name |
| 14250967 | NC_002794.1 | Tupaia herpesvirus |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 10866 | + | 162143 | 90 | 20.5 | -24.7 | NP_116453 | 5' arm 3' arm | ||
| 11117 | - | 160382 | 90 | 19.5 | -30.7 | NP_116452 | 5' arm 3' arm | ||
| 11118 | - | 160686 | 89 | 20.5 | -32.3 | NP_116452 | 5' arm 3' arm | ||
| 10863 | + | 159558 | 90 | 21 | -28.2 | NP_116451 | 5' arm 3' arm | ||
| 11116 | - | 158249 | 88 | 21.5 | -22.3 | NP_116451 | 5' arm 3' arm | ||
| 10859 | + | 157399 | 90 | 20 | -20.5 | NP_116451 | 5' arm 3' arm | ||
| 10860 | + | 158338 | 90 | 21 | -25.1 | NP_116451 | 5' arm 3' arm | ||
| 10861 | + | 159126 | 89 | 22 | -26 | NP_116451 | 5' arm 3' arm | ||
| 10862 | + | 159266 | 88 | 20.5 | -22.3 | NP_116451 | 5' arm 3' arm | ||
| 10857 | + | 156497 | 87 | 21.5 | -23.8 | NP_116448 | 5' arm 3' arm | ||
| 11115 | - | 157060 | 90 | 22 | -31.5 | NP_116448 | 5' arm 3' arm | ||
| 10858 | + | 156972 | 87 | 21.5 | -29 | NP_116448 | 5' arm 3' arm | ||
| 11113 | - | 155308 | 86 | 19.5 | -23.7 | NP_116447 | 5' arm 3' arm | ||
| 11114 | - | 155443 | 89 | 20 | -32.3 | NP_116447 | 5' arm 3' arm | ||
| 10856 | + | 154913 | 90 | 20 | -22.1 | NP_116446 | 5' arm 3' arm | ||
| 11112 | - | 152429 | 87 | 19 | -21 | NP_116445 | 5' arm 3' arm | ||
| 11110 | - | 151349 | 90 | 19.5 | -22 | NP_116445 | 5' arm 3' arm | ||
| 11111 | - | 152153 | 85 | 19.5 | -21.8 | NP_116445 | 5' arm 3' arm | ||
| 10854 | + | 152650 | 87 | 20 | -25 | NP_116445 | 5' arm 3' arm | ||
| 10852 | + | 151640 | 90 | 20 | -19.4 | NP_116445 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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