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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24052 | - | 42120 | 87 | 22 | -26.5 | NP_944296 | 5' arm 3' arm | ||
| 24053 | - | 42223 | 85 | 19 | -20.9 | NP_944296 | 5' arm 3' arm | ||
| 23939 | + | 41648 | 88 | 23 | -21.4 | NP_944295 | 5' arm 3' arm | ||
| 23938 | + | 40982 | 90 | 20.5 | -21 | NP_944295 | 5' arm 3' arm | ||
| 24049 | - | 40631 | 88 | 22 | -26.9 | NP_944294 | 5' arm 3' arm | ||
| 24051 | - | 40990 | 88 | 23.5 | -23.7 | NP_944294 | 5' arm 3' arm | ||
| 24050 | - | 40733 | 87 | 25 | -24.9 | NP_944294 | 5' arm 3' arm | ||
| 24048 | - | 40397 | 89 | 19.5 | -23.5 | NP_944294 | 5' arm 3' arm | ||
| 23937 | + | 40740 | 86 | 19 | -23.5 | NP_944294 | 5' arm 3' arm | ||
| 23936 | + | 40386 | 90 | 20 | -27.2 | NP_944294 | 5' arm 3' arm | ||
| 24046 | - | 39558 | 89 | 19 | -23.1 | NP_944293 | 5' arm 3' arm | ||
| 23933 | + | 38413 | 85 | 20 | -28.9 | NP_944292 | 5' arm 3' arm | ||
| 24043 | - | 37059 | 88 | 20.5 | -20.4 | NP_944291 | 5' arm 3' arm | ||
| 23931 | + | 36802 | 90 | 21 | -23.2 | NP_944291 | 5' arm 3' arm | ||
| 24044 | - | 37341 | 88 | 20 | -25.4 | NP_944291 | 5' arm 3' arm | ||
| 23930 | + | 36333 | 89 | 19 | -26.5 | NP_944291 | 5' arm 3' arm | ||
| 24045 | - | 37540 | 90 | 20 | -20.2 | NP_944291 | 5' arm 3' arm | ||
| 23932 | + | 37926 | 90 | 21 | -26 | NP_944291 | 5' arm 3' arm | ||
| 24042 | - | 35602 | 89 | 21 | -25.5 | NP_944290 | 5' arm 3' arm | ||
| 23928 | + | 34808 | 89 | 19 | -20.8 | NP_944288 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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