miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23928	+	34808	89	19	-20.8	NP_944288		5' arm      3' arm
23929	+	34920	88	20.5	-27.3	NP_944288		5' arm      3' arm
24040	-	34435	90	22.5	-23.5	NP_944287		5' arm      3' arm
23927	+	34202	90	20.5	-23.8	NP_944287		5' arm      3' arm
23926	+	33995	90	22	-22.4	NP_944287		5' arm      3' arm
23925	+	33467	90	19.5	-20.7	NP_944286		5' arm      3' arm
23924	+	33183	90	19.5	-21.5	NP_944286		5' arm      3' arm
24039	-	33804	90	24	-21.6	NP_944286		5' arm      3' arm
24038	-	33354	90	23	-25.7	NP_944286		5' arm      3' arm
24035	-	32781	86	19	-22.9	NP_944285		5' arm      3' arm
24036	-	33054	89	23.5	-21.8	NP_944285		5' arm      3' arm
23922	+	32117	83	19	-23.7	NP_944284		5' arm      3' arm
23923	+	32282	90	21.5	-24.2	NP_944284		5' arm      3' arm
24034	-	32024	89	22.5	-27.6	NP_944284		5' arm      3' arm
24032	-	31581	89	22	-20	NP_944284		5' arm      3' arm
24033	-	31813	89	20	-25.7	NP_944284		5' arm      3' arm
24030	-	31055	90	20.5	-19.8	NP_944282		5' arm      3' arm
24028	-	30489	90	21	-19.4	NP_944281		5' arm      3' arm
24029	-	30598	89	21.5	-23.8	NP_944281		5' arm      3' arm
24027	-	30368	89	23	-26.1	NP_944281		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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