miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8892	-	11167	89	20.5	-26.3	NP_061514		5' arm      3' arm
8891	-	10934	87	19	-26.4	NP_061513		5' arm      3' arm
8890	-	10224	89	20.5	-19.9	NP_061512		5' arm
8805	+	9180	90	20.5	-19.4	NP_061510		5' arm      3' arm
8889	-	8273	85	19.5	-26	NP_061508		5' arm      3' arm
8804	+	8267	84	20.5	-22.5	NP_061508		5' arm      3' arm
8803	+	7362	88	22	-27.4	NP_061507		5' arm      3' arm
8801	+	6793	90	20	-21.6	NP_061506		5' arm      3' arm
8799	+	6546	87	21.5	-22.7	NP_061505		5' arm      3' arm
8798	+	6004	87	23.5	-23	NP_061504		5' arm      3' arm
8884	-	4786	89	20	-21.4	NP_061502		5' arm      3' arm
8886	-	5079	89	21.5	-21	NP_061502		5' arm      3' arm
8887	-	5278	90	22.5	-23.8	NP_061502		5' arm      3' arm
8885	-	4950	90	19	-20.7	NP_061502		5' arm      3' arm
8796	+	3599	89	22.5	-33.9	NP_061501		5' arm      3' arm
8883	-	4329	89	21.5	-27.5	NP_061501		5' arm      3' arm
8882	-	3830	89	20.5	-22.6	NP_061501		5' arm      3' arm
8797	+	3744	90	19	-22.8	NP_061501		5' arm      3' arm
8794	+	2557	86	21	-21.5	NP_061500		5' arm      3' arm
8793	+	2442	90	21.5	-20.3	NP_061500		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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