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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24458 | + | 93083 | 89 | 21.5 | -19.5 | NP_944423 | 5' arm 3' arm | ||
| 24649 | - | 90848 | 87 | 19.5 | -24.3 | NP_944422 | 5' arm 3' arm | ||
| 24456 | + | 90457 | 81 | 19 | -25.9 | NP_944421 | 5' arm 3' arm | ||
| 24454 | + | 89878 | 88 | 19 | -24.5 | NP_944421 | 5' arm 3' arm | ||
| 24648 | - | 90502 | 90 | 20.5 | -27 | NP_944421 | 5' arm 3' arm | ||
| 24455 | + | 90001 | 90 | 21 | -23.9 | NP_944421 | 5' arm 3' arm | ||
| 24644 | - | 88516 | 87 | 24.5 | -26.1 | NP_944420 | 5' arm 3' arm | ||
| 24640 | - | 87436 | 88 | 22.5 | -21.2 | NP_944420 | 5' arm 3' arm | ||
| 24452 | + | 88633 | 89 | 19 | -22.2 | NP_944420 | 5' arm 3' arm | ||
| 24453 | + | 89170 | 81 | 19.5 | -25.8 | NP_944420 | 5' arm 3' arm | ||
| 24450 | + | 87575 | 90 | 19.5 | -25.3 | NP_944420 | 5' arm 3' arm | ||
| 24642 | - | 88087 | 89 | 23.5 | -25.7 | NP_944420 | 5' arm 3' arm | ||
| 24451 | + | 88148 | 90 | 21.5 | -22.8 | NP_944420 | 5' arm 3' arm | ||
| 24637 | - | 86447 | 90 | 21.5 | -21.4 | NP_944420 | 5' arm 3' arm | ||
| 24448 | + | 85394 | 88 | 20.5 | -21.3 | NP_944420 | 5' arm 3' arm | ||
| 24638 | - | 86699 | 88 | 20.5 | -21.8 | NP_944420 | 5' arm 3' arm | ||
| 24639 | - | 87280 | 90 | 21.5 | -23.1 | NP_944420 | 5' arm 3' arm | ||
| 24646 | - | 88868 | 86 | 22.5 | -21.6 | NP_944420 | 5' arm 3' arm | ||
| 24641 | - | 87909 | 88 | 22 | -22.3 | NP_944420 | 5' arm 3' arm | ||
| 24449 | + | 87193 | 89 | 19.5 | -21 | NP_944420 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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