miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
26449	+	4033	83	23.5	-20	NP_958677		5' arm      3' arm
26451	+	4336	89	20	-24.5	NP_958677		5' arm      3' arm
26543	-	3090	90	20.5	-22.5	NP_958676		5' arm      3' arm
26542	-	2177	90	21	-24.3	NP_958675		5' arm      3' arm
26446	+	2165	90	19.5	-28.2	NP_958675		5' arm      3' arm
26448	+	2657	89	23	-24.3	NP_958675		5' arm      3' arm
26447	+	2545	90	24	-22.6	NP_958675		5' arm      3' arm
26541	-	1596	85	22	-29.6	NP_958674		5' arm      3' arm
26445	+	1656	90	22	-22.9	NP_958674		5' arm      3' arm
26540	-	1495	90	20	-28.1	NP_958673		5' arm      3' arm
26443	+	1074	89	20.5	-24.8	NP_958672		5' arm      3' arm
26442	+	823	88	19	-22.7	NP_958672		5' arm      3' arm
26539	-	1050	90	20	-25.3	NP_958672		5' arm      3' arm
26444	+	1177	90	22.5	-22	NP_958672		5' arm      3' arm
26441	+	637	83	19.5	-29.5	NP_958671		5' arm      3' arm
26538	-	419	88	21.5	-21.7	NP_958671		5' arm      3' arm
26603	-	36248	88	24.5	-22.7			5' arm      3' arm
26585	-	31853	85	22	-24.3			5' arm      3' arm
26547	-	6191	81	20	-30.8			5' arm      3' arm
26570	-	24151	87	22	-32.7			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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