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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23909 | + | 22817 | 88 | 20 | -22.2 | NP_944268 | 5' arm 3' arm | ||
| 23954 | + | 52021 | 87 | 19.5 | -22.1 | NP_944303 | 5' arm 3' arm | ||
| 24005 | - | 22725 | 90 | 22.5 | -22.1 | NP_944267 | 5' arm 3' arm | ||
| 23968 | + | 63003 | 86 | 20 | -21.93 | 5' arm 3' arm | |||
| 23993 | - | 15569 | 89 | 19.5 | -21.9 | NP_944257 | 5' arm 3' arm | ||
| 24007 | - | 23836 | 90 | 21 | -21.9 | 5' arm 3' arm | |||
| 23973 | - | 3517 | 89 | 19.5 | -21.8 | NP_944235 | 5' arm 3' arm | ||
| 24070 | - | 50739 | 89 | 21.5 | -21.8 | NP_944303 | 5' arm 3' arm | ||
| 24063 | - | 47583 | 88 | 26 | -21.8 | NP_944302 | 5' arm 3' arm | ||
| 24036 | - | 33054 | 89 | 23.5 | -21.8 | NP_944285 | 5' arm 3' arm | ||
| 23889 | + | 11666 | 90 | 21 | -21.7 | NP_944248 | 5' arm 3' arm | ||
| 24022 | - | 28587 | 90 | 21 | -21.6 | NP_944280 | 5' arm 3' arm | ||
| 24039 | - | 33804 | 90 | 24 | -21.6 | NP_944286 | 5' arm 3' arm | ||
| 24081 | - | 54494 | 90 | 19 | -21.5 | 5' arm 3' arm | |||
| 23924 | + | 33183 | 90 | 19.5 | -21.5 | NP_944286 | 5' arm 3' arm | ||
| 24065 | - | 48435 | 89 | 20 | -21.5 | NP_944303 | 5' arm 3' arm | ||
| 23974 | - | 3904 | 89 | 20 | -21.5 | NP_944235 | 5' arm 3' arm | ||
| 23939 | + | 41648 | 88 | 23 | -21.4 | NP_944295 | 5' arm 3' arm | ||
| 24058 | - | 45382 | 90 | 22 | -21.3 | NP_944300 | 5' arm 3' arm | ||
| 23965 | + | 60689 | 88 | 22 | -21.24 | NP_944303 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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