miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6293	-	120133	88	21.5	-24.3	NP_045282		5' arm      3' arm
6318	-	144732	87	19	-24.2	NP_045296		5' arm      3' arm
6226	+	113318	87	19	-24.2	NP_045281		5' arm      3' arm
6270	-	38142	90	22	-24	NP_045241		5' arm      3' arm
6262	-	14461	89	21.5	-23.8	NP_045229
6309	-	141455	89	21.5	-23.7	NP_045281		5' arm      3' arm
6235	+	116595	89	21.5	-23.7	NP_045281		5' arm      3' arm
6275	-	65875	87	19	-23.6	NP_045252		5' arm      3' arm
6269	-	30208	88	23	-23.6	NP_045238		5' arm      3' arm
6266	-	26217	87	21	-23.3	NP_045236		5' arm      3' arm
6265	-	23877	88	23	-23.3			5' arm      3' arm
6271	-	39901	88	20	-23.1	NP_045241		5' arm      3' arm
6218	+	77999	89	24.5	-23	NP_045260		5' arm      3' arm
6222	+	97071	88	21	-22.7	NP_045271		5' arm      3' arm
6207	+	50843	89	19.5	-22.5	NP_045246		5' arm      3' arm
6244	+	135001	89	21.5	-22.5	NP_045293		5' arm      3' arm
6296	-	127643	84	21	-22.4	NP_045288		5' arm      3' arm
6260	-	12966	81	23.5	-22.3	NP_045228		5' arm      3' arm
6241	+	122401	87	20.5	-22			5' arm      3' arm
6314	-	142530	90	21.5	-22	NP_045296		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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