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| GenBank Identifier | RefSeq Acc. | Name |
| 12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9897 | + | 128200 | 89 | 21 | -23.8 | NP_073381 | 5' arm 3' arm | ||
| 9971 | - | 154396 | 89 | 21 | -23.8 | NP_073366 | 5' arm 3' arm | ||
| 9927 | - | 3700 | 90 | 21 | -23.7 | 5' arm 3' arm | |||
| 9885 | + | 119987 | 90 | 21 | -23.7 | 5' arm 3' arm | |||
| 9932 | - | 10579 | 87 | 21 | -23.4 | NP_073293 | 5' arm 3' arm | ||
| 9958 | - | 132938 | 89 | 20 | -23.3 | NP_073366 | 5' arm 3' arm | ||
| 9911 | + | 149658 | 89 | 20 | -23.3 | NP_073381 | 5' arm 3' arm | ||
| 9898 | + | 128546 | 85 | 20.5 | -23.1 | NP_073381 | 5' arm 3' arm | ||
| 9970 | - | 154050 | 85 | 20.5 | -23.1 | NP_073366 | 5' arm 3' arm | ||
| 9966 | - | 148999 | 88 | 22 | -23.1 | 5' arm 3' arm | |||
| 9903 | + | 133597 | 88 | 22 | -23.1 | 5' arm 3' arm | |||
| 9945 | - | 109181 | 76 | 22 | -23.1 | NP_073349 | 5' arm 3' arm | ||
| 9906 | + | 135624 | 90 | 20 | -22.7 | 5' arm 3' arm | |||
| 9963 | - | 146972 | 90 | 20 | -22.7 | 5' arm 3' arm | |||
| 9873 | + | 24689 | 90 | 21 | -22.6 | NP_073302 | 5' arm 3' arm | ||
| 9875 | + | 38479 | 90 | 21 | -22.5 | NP_073312 | 5' arm 3' arm | ||
| 9895 | + | 126821 | 84 | 23.5 | -22.4 | NP_073381 | 5' arm 3' arm | ||
| 9973 | - | 155775 | 84 | 23.5 | -22.4 | NP_073366 | 5' arm 3' arm | ||
| 9894 | + | 125147 | 89 | 20.5 | -22 | NP_073364 | 5' arm 3' arm | ||
| 9974 | - | 157449 | 89 | 20.5 | -22 | NP_073383 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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