miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24920	-	14603	89	20	-22.2	NP_945047		5' arm      3' arm
24937	-	24846	90	19	-22.2	NP_945060		5' arm      3' arm
24829	+	12072	90	22	-22.2	NP_945044		5' arm      3' arm
24962	-	48507	87	21	-22.2	NP_945102		5' arm      3' arm
24941	-	28077	83	19.5	-22.1	NP_945063		5' arm      3' arm
24902	+	54589	89	19	-21.9	NP_945113		5' arm      3' arm
24904	-	4071	88	21.5	-21.9	NP_945034		5' arm      3' arm
24893	+	47998	89	22.5	-21.8	NP_945100		5' arm      3' arm
24942	-	28223	89	19	-21.8			5' arm      3' arm
24861	+	30427	88	26.5	-21.7	NP_945068		5' arm      3' arm
24901	+	53837	90	21	-21.7	NP_945111		5' arm      3' arm
24891	+	47324	84	19.5	-21.7	NP_945099		5' arm      3' arm
24892	+	47554	90	22	-21.7	NP_945099		5' arm      3' arm
24842	+	16820	90	21.5	-21.7	NP_945050		5' arm      3' arm
24964	-	49151	90	20.5	-21.7	NP_945102		5' arm      3' arm
24844	+	17849	90	19.5	-21.6	NP_945050		5' arm      3' arm
24858	+	27212	90	21	-21.5	NP_945062		5' arm      3' arm
24898	+	51103	89	20	-21.5	NP_945107		5' arm      3' arm
24888	+	45834	90	22	-21.5	NP_945098		5' arm      3' arm
24921	-	14808	89	20.5	-21.4	NP_945047		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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