miRNA display CGI


Results 101 - 120 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635581 NC_002484.1 Pseudomonas phage D3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8932 - 52152 78 20 -21.7 NP_061578 5' arm      3' arm
8929 - 48741 87 21.5 -21.7 NP_061570 5' arm      
8923 - 43979 90 22.5 -21.6 5' arm      
8854 + 37473 90 20.5 -21.6 NP_061549 5' arm      3' arm
8801 + 6793 90 20 -21.6 NP_061506 5' arm      3' arm
8914 - 35329 89 20 -21.6 NP_061547       3' arm
8794 + 2557 86 21 -21.5 NP_061500 5' arm      3' arm
8842 + 31426 89 19 -21.4 NP_061538 5' arm      3' arm
8884 - 4786 89 20 -21.4 NP_061502 5' arm      3' arm
8789 + 799 90 22 -21.4 NP_061498 5' arm      3' arm
8870 + 51342 87 20 -21.3 NP_061576 5' arm      3' arm
8790 + 1128 89 21.5 -21.3 NP_061498 5' arm      3' arm
8812 + 12116 87 23.5 -21.2 NP_061515 5' arm      3' arm
8910 - 29072 88 20.5 -21.2 NP_061535 5' arm      3' arm
8881 - 3470 90 19 -21 NP_061500 5' arm      3' arm
8806 + 10962 79 20 -21 NP_061514 5' arm      3' arm
8858 + 40263 90 22.5 -21 NP_061557 5' arm      3' arm
8886 - 5079 89 21.5 -21 NP_061502 5' arm      3' arm
8927 - 47868 85 20 -21 NP_061569 5' arm      3' arm
8878 - 2535 76 20 -20.7 NP_061500 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.