miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31467	+	35	89	22.5	-23.2			5' arm      3' arm
31469	+	12274	89	22.5	-23.2			5' arm      3' arm
31504	-	27119	90	21.5	-23			5' arm      3' arm
31486	-	6631	87	19	-22.9			5' arm      3' arm
31510	-	14988	90	29	-22.6			5' arm      3' arm
31502	-	24824	90	29	-22.6			5' arm      3' arm
31436	-	2503	90	23.5	-22.6	YP_184799		5' arm      3' arm
31452	+	12959	90	19	-22.4			5' arm      3' arm
31443	+	5247	90	32.5	-22.2			5' arm      3' arm
31501	+	28072	89	20.5	-22.1			5' arm      3' arm
31474	-	10853	90	21	-21.9	YP_184853		5' arm      3' arm
31437	+	699	86	22.5	-21.8			5' arm      3' arm
31471	-	3416	87	20	-21.7			5' arm      3' arm
31475	-	2934	89	27.5	-21.6			5' arm      3' arm
31427	+	12337	86	22.5	-21.4			5' arm      3' arm
31499	+	27030	90	22.5	-21.1			5' arm      3' arm
31439	+	6243	88	27.5	-21	YP_184800		5' arm      3' arm
31514	-	3419	88	27.5	-21	YP_184900		5' arm      3' arm
31498	+	25183	88	19.5	-20.9			5' arm      3' arm
31506	+	15347	88	21	-20.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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