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| GenBank Identifier | RefSeq Acc. | Name |
| 38638196 | NC_005264.1 | Psittacid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24549 | - | 5240 | 90 | 21 | -26.1 | 5' arm 3' arm | |||
| 24341 | + | 6766 | 87 | 22 | -26.1 | NP_944382 | 5' arm 3' arm | ||
| 24567 | - | 25940 | 90 | 21 | -26 | NP_944392 | 5' arm 3' arm | ||
| 24680 | - | 113550 | 89 | 22 | -26 | NP_944435 | 5' arm 3' arm | ||
| 24732 | - | 141699 | 90 | 20 | -26 | NP_944447 | 5' arm 3' arm | ||
| 24331 | + | 781 | 87 | 19.5 | -25.9 | 5' arm 3' arm | |||
| 24456 | + | 90457 | 81 | 19 | -25.9 | NP_944421 | 5' arm 3' arm | ||
| 24510 | + | 137992 | 88 | 20.5 | -25.9 | NP_944445 | 5' arm 3' arm | ||
| 24475 | + | 108540 | 90 | 24 | -25.8 | NP_944434 | 5' arm 3' arm | ||
| 24587 | - | 39284 | 87 | 21.5 | -25.8 | NP_944400 | 5' arm 3' arm | ||
| 24515 | + | 146000 | 90 | 20 | -25.8 | NP_944450 | 5' arm 3' arm | ||
| 24453 | + | 89170 | 81 | 19.5 | -25.8 | NP_944420 | 5' arm 3' arm | ||
| 24576 | - | 32508 | 88 | 20.5 | -25.8 | NP_944395 | 5' arm 3' arm | ||
| 24698 | - | 123558 | 85 | 19 | -25.7 | NP_944452 | 5' arm 3' arm | ||
| 24460 | + | 94461 | 90 | 19.5 | -25.7 | NP_944423 | 5' arm 3' arm | ||
| 24642 | - | 88087 | 89 | 23.5 | -25.7 | NP_944420 | 5' arm 3' arm | ||
| 24613 | - | 64918 | 87 | 20.5 | -25.7 | NP_944409 | 5' arm 3' arm | ||
| 24538 | + | 158614 | 85 | 19 | -25.7 | NP_944452 | 5' arm 3' arm | ||
| 24416 | + | 59965 | 90 | 21 | -25.6 | NP_944409 | 5' arm 3' arm | ||
| 24429 | + | 67423 | 90 | 19 | -25.6 | NP_944410 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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