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| GenBank Identifier | RefSeq Acc. | Name |
| 47835019 | NC_004333.2 | Burkholderia cepacia phage Bcep781 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 17049 | + | 23026 | 88 | 19.5 | -23.2 | NP_705657 | 5' arm 3' arm | ||
| 17118 | - | 5213 | 90 | 21 | -23.2 | NP_705634 | 5' arm 3' arm | ||
| 17180 | - | 29206 | 88 | 19 | -23.2 | NP_705666 | 5' arm 3' arm | ||
| 17081 | + | 37307 | 88 | 21 | -23.2 | NP_705675 | 5' arm 3' arm | ||
| 17147 | - | 15056 | 79 | 19.5 | -23.1 | NP_705644 | 5' arm 3' arm | ||
| 17030 | + | 13545 | 84 | 20.5 | -23.1 | NP_705643 | 5' arm 3' arm | ||
| 17006 | + | 5531 | 89 | 20 | -23.1 | NP_705635 | 5' arm 3' arm | ||
| 17210 | - | 43983 | 88 | 24.5 | -23.1 | NP_705684 | 5' arm 3' arm | ||
| 17202 | - | 40810 | 90 | 21 | -22.9 | NP_705681 | 5' arm 3' arm | ||
| 17188 | - | 33136 | 85 | 19.5 | -22.9 | NP_705671 | 5' arm 3' arm | ||
| 17125 | - | 7896 | 90 | 20.5 | -22.8 | NP_705638 | 5' arm 3' arm | ||
| 17038 | + | 18337 | 87 | 20 | -22.8 | NP_705647 | 5' arm 3' arm | ||
| 17116 | - | 4825 | 90 | 20 | -22.8 | YP_022741 | 5' arm 3' arm | ||
| 17211 | - | 44133 | 87 | 22.5 | -22.8 | 5' arm 3' arm | |||
| 16994 | + | 1099 | 89 | 20.5 | -22.7 | YP_022739 | 5' arm 3' arm | ||
| 17117 | - | 5001 | 88 | 23.5 | -22.7 | NP_705634 | 5' arm 3' arm | ||
| 17136 | - | 11697 | 90 | 19 | -22.6 | NP_705642 | 5' arm 3' arm | ||
| 16998 | + | 2046 | 90 | 19 | -22.6 | NP_705631 | 5' arm 3' arm | ||
| 17053 | + | 23741 | 90 | 23 | -22.6 | NP_705657 | 5' arm 3' arm | ||
| 17068 | + | 31249 | 88 | 22 | -22.6 | NP_705668 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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