miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24812	+	5843	86	19.5	-21.4	NP_945037		5' arm      3' arm
24879	+	39207	90	22.5	-21.4	NP_945084		5' arm      3' arm
24866	+	31838	89	22	-21.4	NP_945070		5' arm      3' arm
24921	-	14808	89	20.5	-21.4	NP_945047		5' arm      3' arm
24940	-	27520	88	19	-21.36	NP_945063		5' arm      3' arm
24828	+	11947	90	19	-21.3	NP_945044		5' arm      3' arm
24837	+	14903	89	20.5	-21.2	NP_945047		5' arm      3' arm
24811	+	4657	90	21	-21.2	NP_945035		5' arm      3' arm
24919	-	11869	90	20.5	-21.2			5' arm      3' arm
24841	+	15911	90	22.5	-21.1	NP_945049		5' arm      3' arm
24865	+	31599	87	20.5	-21.1			5' arm      3' arm
24923	-	15446	90	19.5	-21	NP_945048		5' arm      3' arm
24886	+	45122	89	21.5	-20.9	NP_945096		5' arm      3' arm
24819	+	7978	89	22	-20.8	NP_945042		5' arm      3' arm
24916	-	10980	90	21	-20.8	NP_945044		5' arm      3' arm
24835	+	14414	86	20	-20.7	NP_945047		5' arm      3' arm
24956	-	42897	88	19	-20.7	NP_945090		5' arm      3' arm
24947	-	33941	85	21.5	-20.6	NP_945074		5' arm      3' arm
24880	+	39307	89	20	-20.6	NP_945085		5' arm      3' arm
24870	+	34296	87	22.5	-20.5			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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