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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23896 | + | 14482 | 90 | 19.5 | -22.9 | NP_944255 | 5' arm 3' arm | ||
| 24079 | - | 53994 | 90 | 21.5 | -22.9 | NP_944303 | 5' arm 3' arm | ||
| 24059 | - | 45981 | 86 | 19.5 | -22.8 | NP_944301 | 5' arm 3' arm | ||
| 24013 | - | 26184 | 90 | 21 | -22.8 | NP_944278 | 5' arm 3' arm | ||
| 23946 | + | 45675 | 90 | 21 | -22.7 | NP_944301 | 5' arm 3' arm | ||
| 24097 | - | 58762 | 89 | 21 | -22.7 | NP_944303 | 5' arm 3' arm | ||
| 23944 | + | 43985 | 90 | 19 | -22.7 | NP_944297 | 5' arm 3' arm | ||
| 24024 | - | 29158 | 90 | 22 | -22.62 | NP_944280 | 5' arm 3' arm | ||
| 23900 | + | 17022 | 90 | 20 | -22.6 | NP_944260 | 5' arm 3' arm | ||
| 24056 | - | 44194 | 90 | 20 | -22.6 | NP_944298 | 5' arm 3' arm | ||
| 23871 | + | 4438 | 90 | 19 | -22.6 | 5' arm 3' arm | |||
| 23868 | + | 3557 | 88 | 20 | -22.54 | NP_944235 | 5' arm 3' arm | ||
| 23870 | + | 3848 | 85 | 20.5 | -22.5 | NP_944235 | 5' arm 3' arm | ||
| 24012 | - | 26033 | 90 | 20.5 | -22.5 | 5' arm 3' arm | |||
| 24001 | - | 20611 | 90 | 21.5 | -22.42 | NP_944264 | 5' arm 3' arm | ||
| 23926 | + | 33995 | 90 | 22 | -22.4 | NP_944287 | 5' arm 3' arm | ||
| 23911 | + | 25801 | 90 | 19 | -22.4 | NP_944278 | 5' arm 3' arm | ||
| 24080 | - | 54101 | 89 | 21 | -22.4 | NP_944303 | 5' arm 3' arm | ||
| 23988 | - | 14555 | 85 | 20.5 | -22.4 | NP_944255 | 5' arm 3' arm | ||
| 23941 | + | 42906 | 89 | 21 | -22.3 | NP_944296 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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