miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23748	-	39456	88	20	-24.1	NP_954911		5' arm      3' arm
23620	+	59077	89	21.5	-24.1	NP_954920		5' arm      3' arm
23594	+	42786	90	24	-24.1	NP_954913		5' arm      3' arm
23816	-	96728	89	20.5	-24	NP_954943		5' arm      3' arm
23660	+	96639	90	19	-24	NP_954943		5' arm      3' arm
23729	-	22977	89	21.5	-23.9	NP_954906		5' arm      3' arm
23591	+	38980	89	20	-23.8	NP_954911		5' arm      3' arm
23642	+	82663	87	20.5	-23.8	NP_954934		5' arm      3' arm
23558	+	3677	87	20.5	-23.8	NP_954894		5' arm      3' arm
23751	-	44214	89	19.5	-23.7	NP_954915		5' arm      3' arm
23612	+	54243	88	22.5	-23.7			5' arm      3' arm
23817	-	96927	90	19	-23.7	NP_954943		5' arm      3' arm
23776	-	68426	86	20	-23.6			5' arm      3' arm
23769	-	60935	90	19	-23.6	NP_954922		5' arm      3' arm
23694	+	126632	90	21.5	-23.6			5' arm      3' arm
23618	+	58089	89	20.5	-23.6	NP_954920		5' arm      3' arm
23835	-	116381	90	21.5	-23.6			5' arm      3' arm
23565	+	11824	89	21.5	-23.5	NP_954900		5' arm      3' arm
23743	-	27812	88	21.5	-23.5	NP_954909		5' arm      3' arm
23671	+	103509	85	21	-23.44	NP_954952		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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