miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
18822	+	42131	87	19	-20.6			5' arm      3' arm
18786	+	20250	89	21	-20.7	NP_817697		5' arm      3' arm
18830	+	45786	84	21.5	-20.7	NP_817742		5' arm      3' arm
18852	-	3939	90	21	-20.7	NP_817682		5' arm      3' arm
18945	-	45924	87	22	-20.8	NP_817742		5' arm      3' arm
18884	-	16951	89	21	-20.8	NP_817695		5' arm      3' arm
18963	-	52499	90	19	-20.9	NP_817752		5' arm      3' arm
18776	+	15141	88	19	-20.9	NP_817693		5' arm      3' arm
18942	-	45218	90	26.5	-20.9	NP_817740		5' arm      3' arm
18819	+	40888	90	19	-20.9	NP_817730		5' arm      3' arm
18809	+	36054	90	22	-21			5' arm      3' arm
18756	+	2480	89	23.5	-21	NP_817681		5' arm      3' arm
18925	-	40767	90	19	-21.1	NP_817730		5' arm      3' arm
18896	-	23041	87	20.5	-21.1	NP_817701		5' arm      3' arm
18845	-	1614	90	19.5	-21.2	NP_817679		5' arm      3' arm
18849	-	3499	89	20	-21.2	NP_817681		5' arm      3' arm
18856	-	4823	90	24	-21.2	NP_817683		5' arm      3' arm
18805	+	33814	89	20	-21.2	NP_817720		5' arm      3' arm
18937	-	43815	86	21	-21.3	NP_817738		5' arm      3' arm
18827	+	44718	88	19.5	-21.3	NP_817739		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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