miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
15838	+	136645	90	20	-20.5	YP_214094		5' arm      3' arm
15780	+	96194	90	23	-20.5	YP_214071		5' arm      3' arm
15949	-	22931	90	19.5	-20.5	YP_214029		5' arm      3' arm
16068	-	92270	86	23	-20.5	YP_214069		5' arm      3' arm
16202	-	197195	87	21	-20.5	YP_214140		5' arm      3' arm
15812	+	120999	87	20.5	-20.5	YP_214086		5' arm      3' arm
15967	-	32663	90	19	-20.59	YP_214040		5' arm      3' arm
15808	+	118463	90	21.5	-20.6	YP_214085		5' arm      3' arm
15846	+	142212	89	23	-20.6	YP_214099		5' arm      3' arm
15673	+	19339	88	21.5	-20.6	YP_214026		5' arm      3' arm
16143	-	142977	90	20	-20.6	YP_214099		5' arm      3' arm
15811	+	119137	90	21.5	-20.6	YP_214085		5' arm      3' arm
15759	+	80345	88	19.5	-20.6			5' arm      3' arm
15803	+	115636	85	22	-20.6			5' arm      3' arm
15934	-	846	89	24	-20.6	YP_214009		5' arm      3' arm
15927	+	225303	89	23	-20.7	YP_214166		5' arm      3' arm
15920	+	220630	90	20	-20.7	YP_214161		5' arm      3' arm
15826	+	129010	90	19	-20.7	YP_214088		5' arm      3' arm
15761	+	82346	85	23	-20.7			5' arm      3' arm
15824	+	126858	89	22.5	-20.72			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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