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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24022 | - | 28587 | 90 | 21 | -21.6 | NP_944280 | 5' arm 3' arm | ||
| 23889 | + | 11666 | 90 | 21 | -21.7 | NP_944248 | 5' arm 3' arm | ||
| 24070 | - | 50739 | 89 | 21.5 | -21.8 | NP_944303 | 5' arm 3' arm | ||
| 24063 | - | 47583 | 88 | 26 | -21.8 | NP_944302 | 5' arm 3' arm | ||
| 23973 | - | 3517 | 89 | 19.5 | -21.8 | NP_944235 | 5' arm 3' arm | ||
| 24036 | - | 33054 | 89 | 23.5 | -21.8 | NP_944285 | 5' arm 3' arm | ||
| 23993 | - | 15569 | 89 | 19.5 | -21.9 | NP_944257 | 5' arm 3' arm | ||
| 24007 | - | 23836 | 90 | 21 | -21.9 | 5' arm 3' arm | |||
| 23968 | + | 63003 | 86 | 20 | -21.93 | 5' arm 3' arm | |||
| 24005 | - | 22725 | 90 | 22.5 | -22.1 | NP_944267 | 5' arm 3' arm | ||
| 23954 | + | 52021 | 87 | 19.5 | -22.1 | NP_944303 | 5' arm 3' arm | ||
| 23909 | + | 22817 | 88 | 20 | -22.2 | NP_944268 | 5' arm 3' arm | ||
| 23941 | + | 42906 | 89 | 21 | -22.3 | NP_944296 | 5' arm 3' arm | ||
| 23926 | + | 33995 | 90 | 22 | -22.4 | NP_944287 | 5' arm 3' arm | ||
| 24080 | - | 54101 | 89 | 21 | -22.4 | NP_944303 | 5' arm 3' arm | ||
| 23911 | + | 25801 | 90 | 19 | -22.4 | NP_944278 | 5' arm 3' arm | ||
| 23988 | - | 14555 | 85 | 20.5 | -22.4 | NP_944255 | 5' arm 3' arm | ||
| 24001 | - | 20611 | 90 | 21.5 | -22.42 | NP_944264 | 5' arm 3' arm | ||
| 24012 | - | 26033 | 90 | 20.5 | -22.5 | 5' arm 3' arm | |||
| 23870 | + | 3848 | 85 | 20.5 | -22.5 | NP_944235 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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