miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24902	+	54589	89	19	-21.9	NP_945113		5' arm      3' arm
24904	-	4071	88	21.5	-21.9	NP_945034		5' arm      3' arm
24941	-	28077	83	19.5	-22.1	NP_945063		5' arm      3' arm
24969	-	53037	85	19	-22.2	NP_945109		5' arm      3' arm
24962	-	48507	87	21	-22.2	NP_945102		5' arm      3' arm
24920	-	14603	89	20	-22.2	NP_945047		5' arm      3' arm
24829	+	12072	90	22	-22.2	NP_945044		5' arm      3' arm
24937	-	24846	90	19	-22.2	NP_945060		5' arm      3' arm
24807	+	901	86	23	-22.2	NP_945032		5' arm      3' arm
24859	+	27494	90	20.5	-22.2	NP_945063		5' arm      3' arm
24843	+	16928	87	19.5	-22.4	NP_945050		5' arm      3' arm
24872	+	35182	90	22	-22.5	NP_945077		5' arm      3' arm
24862	+	30680	90	20	-22.6	NP_945069		5' arm      3' arm
24914	-	10376	87	21.5	-22.6	NP_945044		5' arm      3' arm
24955	-	41096	90	19	-22.7	NP_945089		5' arm      3' arm
24927	-	18312	90	25.5	-22.8	NP_945050		5' arm      3' arm
24854	+	25017	90	22.5	-22.8	NP_945060		5' arm      3' arm
24846	+	19374	86	22	-22.8	NP_945050		5' arm      3' arm
24953	-	39698	80	22	-22.8			5' arm      3' arm
24918	-	11419	90	21	-22.9	NP_945044		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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