miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
30165	-	155723	86	21	-20.2	YP_081551		5' arm      3' arm
1768	+	190941	90	21	-20.2	NP_040122		5' arm      3' arm
30194	-	188970	86	19.5	-20.2	YP_081580		5' arm      3' arm
30188	-	186088	88	20	-20.2	YP_081576		5' arm      3' arm
1974	-	155347	86	21	-20.2	NP_040040		5' arm      3' arm
1904	-	78332	79	20	-20.2	NP_039988		5' arm      3' arm
30129	-	120073	90	19	-20.2	YP_081530		5' arm      3' arm
30037	-	43129	89	21	-20.2	YP_081491		5' arm      3' arm
1713	+	141215	88	19	-20.2	NP_783790		5' arm      3' arm
30029	-	38806	90	21	-20.2	YP_081490		5' arm      3' arm
29949	+	196221	90	21	-20.2	YP_081587		5' arm      3' arm
2054	-	229166	90	21	-20.2	NP_040122		5' arm      3' arm
30252	-	234513	90	21	-20.2	YP_081619		5' arm      3' arm
1935	-	119702	90	19	-20.2	NP_040017		5' arm      3' arm
1759	+	176849	89	19	-20.2	NP_040067		5' arm      3' arm
1793	+	215392	87	20	-20.23	NP_783807		5' arm      3' arm
1931	-	111955	87	19	-20.3	NP_040010		5' arm      3' arm
29801	+	90068	90	19	-20.3	YP_081516		5' arm      3' arm
1694	+	132379	90	21.5	-20.3	NP_040023		5' arm      3' arm
1868	-	58429	87	20.5	-20.3	NP_039979		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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