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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 28117 | - | 6618 | 90 | 24 | -24.1 | YP_024928 | 5' arm 3' arm | ||
| 28105 | - | 2797 | 90 | 24 | -24.1 | 5' arm 3' arm | |||
| 28158 | - | 26036 | 89 | 19 | -24.1 | 5' arm 3' arm | |||
| 28002 | + | 2329 | 90 | 19.5 | -24.1 | YP_024923 | 5' arm 3' arm | ||
| 28172 | - | 33271 | 90 | 20 | -24.1 | 5' arm 3' arm | |||
| 28079 | + | 34282 | 88 | 23.5 | -24.1 | 5' arm 3' arm | |||
| 28064 | + | 30065 | 81 | 19 | -24.4 | YP_024952 | 5' arm 3' arm | ||
| 28134 | - | 14363 | 89 | 20 | -24.4 | YP_024936 | 5' arm 3' arm | ||
| 28166 | - | 30153 | 88 | 23 | -24.4 | YP_024952 | 5' arm 3' arm | ||
| 28008 | + | 5881 | 90 | 24 | -24.5 | YP_024927 | 5' arm 3' arm | ||
| 28003 | + | 2550 | 90 | 20 | -24.6 | YP_024923 | 5' arm 3' arm | ||
| 28067 | + | 30545 | 90 | 19.5 | -24.6 | YP_024952 | 5' arm 3' arm | ||
| 28012 | + | 8708 | 88 | 21.5 | -24.6 | YP_024932 | 5' arm 3' arm | ||
| 28137 | - | 16109 | 89 | 21.5 | -24.6 | YP_024936 | 5' arm 3' arm | ||
| 28150 | - | 21710 | 87 | 23 | -24.7 | YP_024939 | 5' arm 3' arm | ||
| 28062 | + | 29772 | 90 | 21.5 | -24.7 | YP_024952 | 5' arm 3' arm | ||
| 28107 | - | 3645 | 90 | 21.5 | -24.7 | YP_024925 | 5' arm 3' arm | ||
| 28156 | - | 24774 | 90 | 19.5 | -24.7 | YP_024945 | 5' arm 3' arm | ||
| 28052 | + | 26993 | 86 | 19 | -24.8 | YP_024948 | 5' arm 3' arm | ||
| 28070 | + | 31303 | 89 | 22.5 | -24.8 | YP_024952 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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