miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24506	+	132357	89	21.5	-21.3			5' arm      3' arm
24746	-	149815	89	21.5	-21.3			5' arm      3' arm
24540	+	159395	90	20	-21.4	NP_944441		5' arm      3' arm
24389	+	43614	89	21	-21.4	NP_944401		5' arm      3' arm
24476	+	110856	88	22	-21.4	NP_944434		5' arm      3' arm
24662	-	100077	81	19	-21.4	NP_944428		5' arm      3' arm
24595	-	48108	88	19	-21.4	NP_944403		5' arm      3' arm
24637	-	86447	90	21.5	-21.4	NP_944420		5' arm      3' arm
24375	+	35931	89	21.5	-21.4	NP_944398		5' arm      3' arm
24743	-	147137	89	19.5	-21.4	NP_944450		5' arm      3' arm
24696	-	122777	90	20	-21.4	NP_944441		5' arm      3' arm
24509	+	136928	90	20	-21.5	NP_944445		5' arm      3' arm
24555	-	11528	87	20	-21.5	NP_944384		5' arm      3' arm
24472	+	105461	90	20	-21.5			5' arm      3' arm
24437	+	73548	87	20	-21.6	NP_944412		5' arm      3' arm
24334	+	2657	86	19	-21.6	NP_944380		5' arm      3' arm
24646	-	88868	86	22.5	-21.6	NP_944420		5' arm      3' arm
24469	+	103412	89	19	-21.6	NP_944431		5' arm      3' arm
24719	-	133758	90	21.5	-21.6	NP_944442		5' arm      3' arm
24386	+	42521	86	25	-21.6	NP_944401		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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