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| GenBank Identifier | RefSeq Acc. | Name |
| 38640309 | NC_005262.1 | Burkholderia cepacia phage Bcep22 |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 24011 | - | 25587 | 90 | 21 | -23.6 | NP_944278 | 5' arm 3' arm | ||
| 23905 | + | 19476 | 87 | 21.5 | -23.6 | NP_944261 | 5' arm 3' arm | ||
| 24051 | - | 40990 | 88 | 23.5 | -23.7 | NP_944294 | 5' arm 3' arm | ||
| 24083 | - | 54791 | 89 | 20.5 | -23.7 | NP_944303 | 5' arm 3' arm | ||
| 23922 | + | 32117 | 83 | 19 | -23.7 | NP_944284 | 5' arm 3' arm | ||
| 23952 | + | 49953 | 84 | 19.5 | -23.7 | NP_944303 | 5' arm 3' arm | ||
| 23927 | + | 34202 | 90 | 20.5 | -23.8 | NP_944287 | 5' arm 3' arm | ||
| 24029 | - | 30598 | 89 | 21.5 | -23.8 | NP_944281 | 5' arm 3' arm | ||
| 23914 | + | 26400 | 90 | 19 | -23.8 | NP_944278 | 5' arm 3' arm | ||
| 23881 | + | 7286 | 89 | 19 | -23.8 | NP_944241 | 5' arm 3' arm | ||
| 23976 | - | 5613 | 87 | 20 | -23.8 | NP_944238 | 5' arm 3' arm | ||
| 23935 | + | 40156 | 87 | 19.5 | -23.9 | 5' arm 3' arm | |||
| 24021 | - | 28329 | 89 | 24 | -23.92 | NP_944280 | 5' arm 3' arm | ||
| 23901 | + | 18021 | 90 | 21 | -24 | NP_944260 | 5' arm 3' arm | ||
| 24004 | - | 21409 | 88 | 22.5 | -24 | NP_944265 | 5' arm 3' arm | ||
| 23862 | + | 1844 | 89 | 24.5 | -24.1 | NP_944234 | 5' arm 3' arm | ||
| 23866 | + | 2847 | 89 | 21 | -24.1 | NP_944235 | 5' arm 3' arm | ||
| 23947 | + | 45816 | 90 | 23.5 | -24.2 | NP_944301 | 5' arm 3' arm | ||
| 24073 | - | 51836 | 87 | 21.5 | -24.2 | NP_944303 | 5' arm 3' arm | ||
| 23923 | + | 32282 | 90 | 21.5 | -24.2 | NP_944284 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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