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| GenBank Identifier | RefSeq Acc. | Name |
| 48697190 | NC_005887.1 | Burkholderia cepacia complex phage BcepC6B |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 27998 | + | 1570 | 89 | 22 | -25.8 | YP_024923 | 5' arm 3' arm | ||
| 28069 | + | 30928 | 90 | 22 | -25.8 | YP_024952 | 5' arm 3' arm | ||
| 28140 | - | 16662 | 90 | 23.5 | -25.8 | YP_024937 | 5' arm 3' arm | ||
| 28077 | + | 33859 | 89 | 23 | -25.9 | YP_024957 | 5' arm 3' arm | ||
| 28113 | - | 5224 | 90 | 20.5 | -26 | YP_024926 | 5' arm 3' arm | ||
| 28032 | + | 18146 | 88 | 19 | -26 | YP_024937 | 5' arm 3' arm | ||
| 28118 | - | 6946 | 89 | 20 | -26.1 | YP_024928 | 5' arm 3' arm | ||
| 28133 | - | 13813 | 90 | 21.5 | -26.2 | 5' arm 3' arm | |||
| 28178 | - | 40544 | 90 | 22.5 | -26.2 | YP_024966 | 5' arm 3' arm | ||
| 28116 | - | 6356 | 89 | 21.5 | -26.4 | YP_024928 | 5' arm 3' arm | ||
| 28160 | - | 27389 | 90 | 23 | -26.6 | YP_024948 | 5' arm 3' arm | ||
| 28171 | - | 32798 | 90 | 20.5 | -26.7 | YP_024954 | 5' arm 3' arm | ||
| 28028 | + | 17001 | 84 | 21 | -26.7 | YP_024937 | 5' arm 3' arm | ||
| 28104 | - | 1711 | 87 | 23.5 | -26.8 | YP_024923 | 5' arm 3' arm | ||
| 28047 | + | 24853 | 89 | 19 | -26.9 | YP_024945 | 5' arm 3' arm | ||
| 28045 | + | 24225 | 90 | 21 | -26.9 | YP_024945 | 5' arm 3' arm | ||
| 28061 | + | 29259 | 87 | 24.5 | -27 | 5' arm 3' arm | |||
| 28102 | + | 42166 | 87 | 23 | -27.1 | YP_024966 | 5' arm 3' arm | ||
| 28122 | - | 8115 | 89 | 21.5 | -27.3 | YP_024931 | 5' arm 3' arm | ||
| 28146 | - | 19069 | 90 | 22.5 | -27.4 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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