miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29097	-	126017	90	21	-22.3	YP_067998		5' arm      3' arm
29030	-	67757	89	19	-22.3	YP_067958		5' arm      3' arm
28765	+	38540	88	23.5	-22.3	YP_067946		5' arm      3' arm
28760	+	34442	88	26	-22.3			5' arm      3' arm
28860	+	126923	87	22	-22.3	YP_067999		5' arm      3' arm
28875	+	138584	88	24	-22.31			5' arm      3' arm
29133	-	155322	87	19	-22.4	YP_068010		5' arm      3' arm
28793	+	54474	88	19.5	-22.4	YP_067951		5' arm      3' arm
28729	+	3681	88	19	-22.4	YP_067940		5' arm      3' arm
28831	+	95437	87	20	-22.5	YP_067977		5' arm      3' arm
28824	+	91164	89	20	-22.5	YP_067973		5' arm      3' arm
28736	+	8056	89	28.5	-22.5			5' arm      3' arm
29035	-	78524	86	19	-22.6	YP_067966		5' arm      3' arm
28928	+	164439	90	19.5	-22.6	YP_068017		5' arm      3' arm
28871	+	134458	88	24	-22.6			5' arm      3' arm
29062	-	97062	89	20	-22.6	YP_067978		5' arm      3' arm
28820	+	87841	88	22.5	-22.7	YP_067971		5' arm      3' arm
28869	+	134127	90	20	-22.8			5' arm      3' arm
29089	-	119843	90	22	-22.8	YP_067995		5' arm      3' arm
29109	-	133631	86	21.5	-22.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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